| ZKO number |
ZKO169 |
| Recent progress of this line |
F1 individuals have been identified
|
|
Gene name |
grin2ab
|
|
Ensembl ID |
ENSDARG00000070543
|
|
Zebrafish strain |
AB
|
|
Cas9 target site 1 sequence |
sense strand
GGAGGAAGCCCGTTCGCTAggg
|
|
Cas9 target site 2 sequence |
|
|
Position in the gene |
exon2
|
|
Restriction enzyme (RE) |
T7
|
|
PCR primer (forward) |
tgggaccttcagagcgtagtgac
|
|
PCR primer (reverse) |
catcaggtatccggccttcttct
|
|
Length of expected PCR product (bp)
|
358
|
|
Length of expected RE digestion product (bp) |
148+210
|
|
Plasmids used for making Cas9 mRNA |
pGH-T7-zCAS9
|
| Plasmids?used?for?making?gRNA |
pMD19T-gRNA
|
| Primers?used?for?making?gRNA |
Pr-ZKO 169
|
|
Dosage of injected Cas9 mRNA (ng/ul)
|
200
|
|
Dosage of injected gRNA (ng/ul)
|
30
|
|
Survival rate of F0 embryo @ 1dpf (%)
|
70
|
|
Method to estimate mutation efficiency |
T7EI detection
|
|
Stage of the embryos collected for mutation detection |
http://www.zfish.cn/upload/file/ZKOPDF/ZKO169.pdf
|
|
Mutation efficiency in F0 embryos (%)
|
20
|
Picture?from?F0?embryos
? (gel?picture?or?sequencing?picture) |
|
|
Mutation type
|
deletion
|
|
Germline transmission efficiency in adult F0
|
15
|
|
Wild-type (WT) sequence
|
cccgaggaccgagctcatgtgcagctcaaacgcatccagtcgcccgtcatcctcctctactgttccaaagatgaagcagcgctggttatggaggaagcccgttcgctagggctcacaggggctggctttgtgtggattgttcctagcctgacgacagggaatctcgaacatatcccggaagcctttccggcagggatgat
|
Germline mutations in selected F0
(By screening F1 embryos) |
F0-1 |
GCAGCGCTGGTTATGGAGGAAGCCCGTTCGGGCTCACAGGGGCTGGCTTTGTGTGGATTG (-4bp)
|
|
F0-2
|
cccgaggaccgagctcatgtgcagctcaaacgcatccagtcgcccgtcatcctcctctactgttccaaagatgaagcagcgctggttatggagggctcacaggggctggctttgtgtggattgttcctagcctgacgacagggaatctcgaacatatcccggaagcctttccggcagggatgat(-16bp)
|
Mosaicism in selected F0
(By screening F1 adults) |
F0-1
|
GCAGCGCTGGTTATGGAGGAAGCCCGTTCGGGCTCACAGGGGCTGGCTTTGTGTGGATTG (-4bp)
|
|
F0-2
|
cccgaggaccgagctcatgtgcagctcaaacgcatccagtcgcccgtcatcctcctctactgttccaaagatgaagcagcgctggttatggagggctcacaggggctggctttgtgtggattgttcctagcctgacgacagggaatctcgaacatatcccggaagcctttccggcagggatgat(-16bp)
|
|
Allele name and predicted product
|
169a
169b |
truncated protein (248aa)
|
| truncated protein (244aa) |
|
突变创建时间 |
2014-09-05
|
|
填表时间 |
2014/3/19
|
|
修改时间 |
2016/9/23
|
|
PI/负责人 (工作单位) |
|
